Bidirectional promoters generate pervasive transcription in yeast

Reference:

Bidirectional promoters generate pervasive transcription in yeast, Zhenyu Xu⁺, Wu Wei⁺, Julien Gagneur, Fabiana Perocchi, Sandra Clauder-Münster, Jurgi Camblong, Elisa Guffanti, Françoise Stutz, Wolfgang Huber and Lars M. Steinmetz^*. Nature 457, 1033-1037 January 25,2009 PubMed

Array data:

At ArrayExpress, accession number E-TABM-590

Additional Data

Compressed tab-delimited text file of normalized probe intensities [ normProbeIntensity ]
For genomic positions with a unique and perfect probe match, these files contain the probe's normalized mean intensity over the replicate samples for different conditions

Additional References:

A high-resolution map of transcription in the yeast genome, Lior David⁺, Wolfgang Huber⁺, Marina Granovskaia, Joern Toedling, Curtis J. Palm, Lee Bofkin, Ted Jones, Ronald W. Davis, Lars M. Steinmetz^*. PNAS, 28 March 2006, for a general description of the tiling array applied in Yeast

A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome,,Travis N. Mavrich, Ilya P. Ioshikhes, Bryan J. Venters, Cizhong Jiang, Lynn P. Tomsho, Ji Qi, Stephan C. Schuster, Istvan Albert, and B. Franklin Pugh. Genome Research, 12 June 2008, The nucleosome positioning data used in the paper, see their 2007 Nature paper and their website as well.

The tilingArray package in Bioconductor, for the software that has been used for analyzing the tiling array.

CSS template from freecsstemplate
Zhenyu Xu

Bidirectional promoters generate pervasive transcription in yeast

New Query

Reference:

Array data:

Additional Data

Additional References: